rs47349787 SNP Detail

Summary

• ID
  rs47349787
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52404985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GTCCGTCTGA GTGTATGTAT AGAGAAATGG AATCTTGAAC
  TTGAAGATAT ATCTGATATA TTGCCACTGA TATAAATACC TGGCAATACC ATTTTGTGCG
  T
  TTTTTTTCTT TGAACCATAC ATTTTATTTA GCCCAAACTA GATACATTGC CAAGGTAGGA
  GTTGGGCTGT GAGGGTTAGT GGGGTTATAT TTTGTCAAAT G                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135176543	ENSMUSSNP1748756	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs47349787					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52404985 () rs orientation: forward

Symbol	Name	Function Class
Rr576529	regulatory region 576529	1832 bp distal
Rr576530	regulatory region 576530	334 bp distal
Rr576531	regulatory region 576531	1373 bp proximal