rs47336369 SNP Detail

Summary

• ID
  rs47336369
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165473452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGCAGCAT TAAAGACTCA
  GCCTATTTCC TGGGGTTGAG CAGGAGAGGG TTAGACACCA GGTAACGCTC AAAACAGACT
  GACTGGGTCA TCACTGCCTG GCATACTAGC CCTGTGACTT GTGACAAAGC AAACCACAGG
  GAAACACCCC CCACCCCCAA GCCAGTTCCT GCCTTTACAG AGGACCCGGC CACCGGCCGG
  C
  CGATCCAGCT CAGAGATCTT TTTCTAAGTC CATCTACATA AAGTGGGCTG TTCTCAGCCC
  AGGACTCACT CTCCTGCTCC AGTCATCTAG GTCAGTGCTT CCCTAATTCC CTAATGCCCA
  GGTCTTTAGC ACAGTTCCTC ATGTTGTAGA GACCTCCACC CAGGAAATGA TTTCATTTTT
  ACTTCATAAC TATAATTTTG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148241931	ENSMUSSNP5254899	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47336369					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165473452 () rs orientation: forward

Symbol	Name	Function Class
Eya2	EYA transcriptional coactivator and phosphatase 2	Intron
Rr569968	regulatory region 569968	1158 bp distal
Rr569969	regulatory region 569969	445 bp proximal
Rr569970	regulatory region 569970	1452 bp proximal