rs47327492 SNP Detail

Summary

• ID
  rs47327492
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38829100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAAGATA CTTCTGATAG
  GAATTTTGTC ACAGAAACAA GAAATCTTGC CCATACAAAG CTGAAGTCTA AGACAAAATA
  CTCAATGATT GTCTCAGCTC TTCATGGTCG TATCCATGAA CTGTTTATGA TTTTTATGGA
  AAAAAATCAA GACTGTGTTA CAGGACATTT AACCTTGGAG TGATATAGAT ACACTTATAT
  T
  CGTTTGATTT CATTTTCACC GGGGAAAAAT GTAGCCTTGG GAAAACCTTG TCAGGAAGAA
  GCATCACTAG AGAGCGAGCA TGACTTCAGA CCCTCAAAGA ACAGCACAAA TAACAAAATT
  ACCTCACTTC TACTGTGACA CCATCCACCC AAAGCCCTAG TAATGGATGC GGTCATCCTA
  ACCCGCACAG AGGCAGGACC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss134843730	ENSMUSSNP1099735	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss320722858	CHEV_3_38673873	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs47327492					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38829100 () rs orientation: forward

Symbol	Name	Function Class
Rr575702	regulatory region 575702	1895 bp proximal