rs47327426 SNP Detail

Summary

• ID
  rs47327426
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:19718235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTCTCCAGT GCTTTGAAGA AAAGTAAACT CTCTCCCTGT
  TCATGTGTTT ATTTCAGTTG TTGGACTTCT TAAGAAAATA AGATAAAAAA AAAAAACATC
  R
  TCAGTATAGG GTCATGCATA TTGTGTAGGA TATACTGGTC TAAACATGAC TATTTTGAAT
  GTCTACATTC ATGTCTTATA CCAGTACTTT CATGGGAAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134669663	ENSMUSSNP2910521	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47327426					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19718235 () rs orientation: forward

Symbol	Name	Function Class
Rr574018	regulatory region 574018	390 bp distal
Rr574019	regulatory region 574019	371 bp proximal
Trim55	tripartite motif-containing 55	Intron