rs47326953 SNP Detail

Summary

• ID
  rs47326953
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102276904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCAGAGC CACTGGGGGC
  TTTCCTTCCT CATTCTCCTC CATTCTGTTT GTCTTCTTCT CACTATTTGG GATCAGTTGT
  TGTGTGGGGT GAAGCAGTAC ATGGAGGGGC AAAGTAGCAC CCAAGGTCAG ATGATCCATG
  ACTCATAAAT AGCTTCTAAT ATCTGAGGAG CCTGCAAAAT TCCACAGCTC ATCGCTCCCC
  R
  AAACTAACGG GCCATGTGAA AAACAGAACT ACAGTCTCCC CGTAAGGAAG AGGGAGGTAC
  CTATGCTAAC TCTACCACAG AGGACATCTT CAAAAATAGA TGCCCTAGTG TGGCGACCAT
  GTTGTCTAGG TATCTCTTGC CAGACTCATT CACTCCTCTC CAGCCCGTAG AAAGTGTTCT
  TATAACCACA ATGAAAAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147112203	ENSMUSSNP5244150	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320437718	CHEV_2_102286716	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47326953					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102276904 () rs orientation: forward

Symbol	Name	Function Class
Rr561693	regulatory region 561693	1265 bp proximal