rs47323010 SNP Detail

Summary

• ID
  rs47323010
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:8103658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CACCCTAAAA GCAAATGGGA AAGGTATTAG TACGCAAAGG
  AAAGTAAGAG TTTTAAAAGA GTTTACATTA TAGTGACTGA TATTTATGGT CCAAATAATT
  Y
  TTTTAATCAA GCACCGAGAT TATTGCTTAT TCCAAGTGAG TAATTCTGAC GTTGAGATTT
  GTAACTGGGA AGAAAAGATT AGTTTCAACA TTTACACAGG A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132961559	ENSMUSSNP966405	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47323010					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8103658 () rs orientation: forward

Symbol	Name	Function Class
Col28a1	collagen, type XXVIII, alpha 1	Intron
D6Mit348	DNA segment, Chr 6, Massachusetts Institute of Technology 348	1449 bp proximal
Rr626348	regulatory region 626348	1270 bp proximal