rs47321660 SNP Detail

Summary

• ID
  rs47321660
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121217798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG GCTATATCCA TTCTCTGGTT
  A
  TGATGTGTTT TATGGAGAGG GTGTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss135720466	ENSMUSSNP5864131	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320903376	CHEV_3_121127067	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs47321660					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121217798 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13758	CpG island 13758	1807 bp proximal
Gm42928	predicted gene 42928	87 bp downstream
Rr375667	regulatory region 375667	1142 bp downstream
Rr584073	regulatory region 584073	1858 bp proximal