rs47310870 SNP Detail

Summary

• ID
  rs47310870
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:121070108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTG TCTCTGACAA CTGGGGACAG
  Y
  TGTGTCACAG TGACCAGGTA TGGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss137064654	ENSMUSSNP4082773	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss323230739	CHEV_9_121150160	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47310870					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121070108 () rs orientation: forward

Symbol	Name	Function Class
Gm56090	predicted gene, 56090	1300 bp upstream
Rr688904	regulatory region 688904	461 bp distal
Rr688905	regulatory region 688905	553 bp distal
Rr688906	regulatory region 688906	849 bp proximal
Ulk4	unc-51-like kinase 4	Intron