rs47294837 SNP Detail

Summary

• ID
  rs47294837
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129816182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCAAGAAAT GCAGTGTGCA CCTACAATCC CAGGTCTGGG
  GGCAGAGACA GGAGGATACC TGGAGCTTGC TGGTCAGTGA GTCTAGCTGA ATCGGGGAGC
  R
  CCAGTGTCAG TGGGAGACCC TGTCTCCGGG AGTAAGGTGG AGAGTGACCG AGGAAGACAC
  TGGAGTCCTC TCAGGATCCC ACACACACTC AGATCCATG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147454264	ENSMUSSNP3654123	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321316064	CHEV_4_129599633	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47294837					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129816182 () rs orientation: forward

Symbol	Name	Function Class
Rr600382	regulatory region 600382	898 bp distal
Rr600383	regulatory region 600383	1150 bp proximal
Rr600384	regulatory region 600384	1773 bp proximal