rs47293257 SNP Detail

Summary

• ID
  rs47293257
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117668635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGAAGAA ACCCTCGGCA
  TGATAAGGAA GTCGGACCCA GCTGTCCCCA GTTCCCATGA CCCTGGGGCT CCATAGCAGG
  AGCTCACAAC ATGACCCAGG CATTCTTTCC CTTAGAATGA TACGACCCTT GGCTGATGTG
  TTGTTAGTGA CATTGGTTTC ATCATGATGT TTTTTTTTTT TATTTAAGAT TTATTTATTG
  R
  TTATATGTAA GTACACTGTC GCTGTCTTCA GACACTCCAG AAGAGGGAGT CAGATCTCCT
  TACAGATGGT TGTGAGCCAC CATGTGGTTG CTGGGATTTG AACTCCGGAC CTTCGGAAGA
  GTAGTCGGGT GCTCTTACCC ACCAGCCCGT GATGGTTCTT TAACAACAAC CCAGAGAAAG
  CCATACAGTG TTGAGTTGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147294307	ENSMUSSNP5122447	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47293257					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117668635 () rs orientation: forward

Symbol	Name	Function Class
Gm68791	predicted gene, 68791	1405 bp downstream
Rr598215	regulatory region 598215	1618 bp distal
Rr598216	regulatory region 598216	298 bp distal
Rr598217	regulatory region 598217	33 bp proximal
Rr598218	regulatory region 598218	1458 bp proximal