rs47290188 SNP Detail

Summary

• ID
  rs47290188
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137528284 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGAA GCTACAGTGG ACCTGTAGAG
  G
  TTAAAGGACA ACTTTTGGCA ATCAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147620389	ENSMUSSNP4725072	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321367582	CHEV_4_137356888	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs47290188					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137528284 () rs orientation: forward

Symbol	Name	Function Class
Rr377269	regulatory region 377269	within coordinates
Rr602728	regulatory region 602728	271 bp distal
Rr602729	regulatory region 602729	81 bp proximal
Rr602730	regulatory region 602730	677 bp proximal