rs47285012 SNP Detail

Summary

• ID
  rs47285012
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:106897563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTTGG AAGAATGTCC
  TTGTATTAGA TTAGGGTCTA AGAAATTCTC AATAATGTTT GTAATAGAGA AGTCTCTGGG
  CAAAAGTTAC AATTCTTCCT TTCTCATTTT CCCTAGAGCA TTGAAAAAAG TCTTTCTGAA
  ACTGACATGA TAAAAACACT TATGGGGCTG GGCAGTGATG GCTCATGCCT TTAATCCTAG
  Y
  ACTTGGGAGG AAGACGCAGG TGGATTTCTG AGTTTGAGGC CAGCCTGGTC TAAAGAGTGA
  ATTCCAGGAC AGCTAGGACT ACACAGCGAA ACCCTGTCTT CAAAAACAAA AACAAAAACA
  AAAAACAAAC AAAACAAAGC AAAATAAAAC AAAACAACAA CAATAACAGC AAAAACACTT
  ATGGGGTTCT TATAAACATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133479547	ENSMUSSNP6834312	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47285012					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:106897563 () rs orientation: forward

Symbol	Name	Function Class
Rr635980	regulatory region 635980	350 bp proximal