rs47283101 SNP Detail

Summary

• ID
  rs47283101
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122210922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGACAGAGAG ACACAGAGAC AGGGAGAGAC AGAAAGAGAC
  ACATAGTTTT AATTGTGGCT TAGGTGAATA CTAACCAAAA CTGATATTAC TCTTTCATTC
  Y
  GTTAAATTGC ACTCTTACTA ATTCCTGTTA CTGTATAATA ATCCACACAT ATTCACACTA
  GATGAATGGG AAACTTCTAA TCAGTAAAAC ATTCTTATA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135741243	ENSMUSSNP1937567	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss320911454	CHEV_3_122120191	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47283101					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122210922 () rs orientation: forward

Symbol	Name	Function Class
Rr584325	regulatory region 584325	1538 bp proximal