rs47276186 SNP Detail

Summary

• ID
  rs47276186
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:172344735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATGT GAGTACACTG TCACTGTCTT
  Y
  AGACACACCT GCAGAGGGCA TCGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss120011726	PARCsnp_1.19941	PARC_SEQ	INBRED	f	SNP			C	T
ss120014620	PARCsnp_1.09989	PARC_SEQ	INBRED	f	SNP			C	T
ss146194120	ENSMUSSNP2994562	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss320125822	CHEV_1_174447299	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs47276186					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172344735 () rs orientation: forward

Symbol	Name	Function Class
Gm70635	predicted gene, 70635	within coordinates
Rr372460	regulatory region 372460	912 bp upstream
Rr423606	regulatory region 423606	1126 bp distal
Rr423607	regulatory region 423607	1037 bp proximal