rs47272449 SNP Detail

Summary

• ID
  rs47272449
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136867897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGGGACCA GGTGCAGCAG
  CCAGGAGGTC CAAGAGAGAG CAGTCGGTAG GACCAAGTTG GATTATATCG GGAAGGGCAG
  CTCGTCCCCT GAACTGGAGT GTAGGGTAGT GGGTGAGGTA TGCCAGCCAT ACTGTCACAG
  GTGAGGGATA CAGGGAGGAC CTGGGAGAGT CACTGGTCCT CCCTGCTGCT CCCTGAACAC
  R
  GTGAAAGATG TGCCCACGGG AATAGAAGGT CCTGATGGTG TCCGACAGGT GGGGATGCCT
  TAACCTAAGC CACAGAGAGG CTTCTCCATC CTCCCTCCCT GGGGGCTCAC AGAAGAGGAA
  GTCATCAGGG AACCAAGTTC CTGGACGTCC AGATGTTTCT TTGTAGCTCA GCTGCACCAA
  GCAAATGCCA CCTTTCCCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147595843	ENSMUSSNP2534862	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47272449					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136867897 () rs orientation: forward

Symbol	Name	Function Class
Gm31762	predicted gene, 31762	within coordinates
Rr602553	regulatory region 602553	1622 bp proximal
Rr602554	regulatory region 602554	1881 bp proximal