rs47255040 SNP Detail

Summary

• ID
  rs47255040
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:81041612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGTCAAC CTTCAAGAAA
  ATGCTTCAGT TTTGAAGTAG CAAAGGAAAC CTTTGTGCTA GTGCTTCACT GCCTGTAAAA
  CCTCTTTTCT GCAGAAAGTA TTGAAGTATT TGAATCCTGT CTTCAGCTGT CCACAAGGGC
  CCTGAGCTCA TTTGTTAATA AAGAAGACTT CCATTTGAAA ATCATGTTTG ATAAATGAAG
  R
  ACAGATCATT TTAAAGCATC AAATGTGTTC TTTTAAAGAA TGTTTGAAAT GTTCTCAATG
  ACAAATACAT TGGGGTGGAA GGAATATTCA TTATGTGGAA GTAGGCTACT CCAAATGTCA
  GGGTCTCTAC TGAGTCCCTG GGGTTCAGAC TCGACATAGA TCACAATTAT ATCATAATGC
  AGATTTCACA AAATTGAGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146846125	ENSMUSSNP6558677	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47255040					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:81041612 () rs orientation: forward

Symbol	Name	Function Class
Rr594197	regulatory region 594197	762 bp proximal