rs47254693 SNP Detail

Summary

• ID
  rs47254693
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130907895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGTCTCCTG GCCTCAAGGT ATCCTCCCAT GTCGATACAC
  AGCACAAGGC GTAGGAAAAG TGGCAGATTT TTTTAAATTA AGTTTTCTTT CCAAAATATA
  K
  ATTCAGAAAT GTGAGATTTT CACAAAGTGA ACCTGCTCAC TTCCCTGGCT CTCGAATCTC
  CATTGTGGCT CCCGCCCATC CCTTTTGCCC ACCAGTGGC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147598242	ENSMUSSNP6281973	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47254693					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130907895 () rs orientation: forward

Symbol	Name	Function Class
Rr565176	regulatory region 565176	1645 bp proximal
Tssr26336	transcription start site region 26336	1311 bp downstream