rs47251575 SNP Detail

Summary

• ID
  rs47251575
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147515115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACAGAAATA TGGATGAGGG GTTACTTACA GGGCAGAAAT
  GACTCAAAGA CAACCATTTC TCCAAAATAT CATCCCTCAT GTAATCTGGA AAATTCTAGT
  G
  TACTGTATAA CCTAAAGGTA GGTCAGTATG TCAGAGAGTA TCCTTTCCTG TTATATCCCT
  TGGTCTCAGC CTCTTCCAGA TGGCTCAGTT TATATGAGA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147959786	ENSMUSSNP1712745	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs47251575					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147515115 () rs orientation: forward

Symbol	Name	Function Class
Rr398814	regulatory region 398814	1588 bp downstream
Rr398815	regulatory region 398815	1147 bp downstream
Rr398816	regulatory region 398816	241 bp downstream
Rr398817	regulatory region 398817	331 bp upstream
Rr604487	regulatory region 604487	1497 bp proximal