rs47250991 SNP Detail

Summary

• ID
  rs47250991
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:85181103 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCCTCCA TCATTGTTGG
  CAACCACAAT GTCGTTATCA CCGAAAGCTA CTACTTCCTC CTGAGTTGGC TATCTTGGTG
  GAGCTACTGG TGGACGCAGG ATCTTTGTAT ATTCTTATCT CTGAGCAGCA TACCAAGCCC
  CCATCCCATA TTTTAGGCAT ATTGCTTTTA ACAGCCAGCC AGGAGAGCCC ACTAATGTCT
  Y
  AGTGCCCTGG GTTCCTGTCA GGGGGCCCCA TGCCCCTGAG AAGCCAATTC TTGAGAAATT
  GAGGCTCCCA CCTATGTGAA TCCCCTTCAA AACACCAGGG GCAGTTTCCC TTTGAAGGGC
  TTGCATCATT TCTGAGATAG AGTGGGGAGG CACGAACACT CCTAATACCA TTTGGACTTG
  GTTGCCACAT GTGCATCATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52449463	NES15419249	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47250991					SNP	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52449463	NES15419249	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:85181103 () rs orientation: forward

Symbol	Name	Function Class
Dlst	dihydrolipoamide S-succinyltransferase	mRNA-UTR
Rps6kl1	ribosomal protein S6 kinase-like 1	920 bp downstream