rs47244503 SNP Detail

Summary

• ID
  rs47244503
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149653503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGA CCCCTTTGAT TCCTTTAAAC
  R
  TATGTTACAA TTTAAGTGTG GCCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148036232	ENSMUSSNP6409672	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss321426235	CHEV_4_148943155	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47244503					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149653503 () rs orientation: forward

Symbol	Name	Function Class
Gm13066	predicted gene 13066	1256 bp upstream
Gm68087	predicted gene, 68087	1862 bp downstream
Gm70645	predicted gene, 70645	within coordinates
Rr604967	regulatory region 604967	1382 bp distal
Rr604968	regulatory region 604968	1267 bp distal
Rr604969	regulatory region 604969	852 bp distal
Rr604970	regulatory region 604970	45 bp distal
Rr604971	regulatory region 604971	448 bp proximal