rs47222576 SNP Detail

Summary

• ID
  rs47222576
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119830351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAACAAATAA ATAAAAATTT AAGCTGTATA ATCCGGACAC
  TTTGGATTCT CCCTTCTCCT CATCTCTCTC TGCGTGCACG TGCCCCCTTC TCTTTTTCTG
  G
  CCCTGCCCTA TCCCCCTTTC CCCATAGCAA CTTCCCTGGC CTCAGTTGGG GCCCATAAAC
  TCATCCATCC ACCAGAAAGC AGCTTCCCTA TAAACCTGC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133593602	ENSMUSSNP4947655	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47222576					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119830351 () rs orientation: forward

Symbol	Name	Function Class
Rr380000	regulatory region 380000	562 bp upstream
Rr637739	regulatory region 637739	885 bp proximal