rs47214087 SNP Detail

Summary

• ID
  rs47214087
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146735042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGAGCTAA GAGTTATAAA
  CTCATGGTTT TCTATTTTGC CTTTCCAACA ACTTGTCAAG AAAAAGACCA GACGCATTTC
  ATGGTCCCAC AGGATTCTAT GTGCTTCCTA GCTTTCTCCA CAGTTGAGGT CATAGGACTG
  ATTCTGACCT ATGAGCTGTA AAGGGATGTT TGTCATTGTT CATTTGCAGT ACTTAAGAGA
  Y
  GTAAGTTCTC CAGGCTCTTT CCCACCTGCA AAACAGGAGG AGATTGTAAG ATAGTCAAGA
  TTCTGATGAG CCCTACATAG ATCCCTGAGC ACCTCCAGGA GCAACATGGC TTCCCAGACC
  CAACCTCAGG CGTGAGTGAG AAACATTTAC TATGGTAAGT CATGGGTTGA CTTGATCCTA
  AAACATGTGC TAGTGTCTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	NZW/LacJ	PWD/PhJ
ss61096811	NES16602380	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	NZW/LacJ	PWD/PhJ
rs47214087					SNP	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61096811	NES16602380	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146735042 () rs orientation: forward

Symbol	Name	Function Class
Rr587113	regulatory region 587113	622 bp proximal
Rr587114	regulatory region 587114	994 bp proximal