rs47210021 SNP Detail

Summary

• ID
  rs47210021
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:75770795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCT TTTACCTACT CACCTCACCA
  G
  AAAGTCTATC CTGCAGATGG GTGGT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147174712	ENSMUSSNP197143	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss323363295	CHEV_10_75397706	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47210021					SNP	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:75770795 () rs orientation: forward

Symbol	Name	Function Class
Chchd10	coiled-coil-helix-coiled-coil-helix domain containing 10	Intron
Cpgi1737	CpG island 1737	686 bp proximal
Rr401998	regulatory region 401998	783 bp upstream
Rr434182	regulatory region 434182	1821 bp distal
Rr434183	regulatory region 434183	1594 bp distal
Rr434184	regulatory region 434184	450 bp proximal
Rr434185	regulatory region 434185	1882 bp proximal
Tssr94147	transcription start site region 94147	1608 bp downstream
Tssr94148	transcription start site region 94148	1584 bp downstream
Tssr94149	transcription start site region 94149	895 bp upstream
Tssr94150	transcription start site region 94150	917 bp upstream
Tssr94151	transcription start site region 94151	1265 bp upstream
Tssr94152	transcription start site region 94152	1313 bp upstream
Tssr94153	transcription start site region 94153	1344 bp upstream
Tssr94154	transcription start site region 94154	1363 bp upstream
Tssr94155	transcription start site region 94155	1443 bp upstream