rs47206340 SNP Detail

Summary

• ID
  rs47206340
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:118183672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGA ACAGGGTCTC TCACTGATCC
  Y
  AAAGCTCGCT GTTTCTGCTA GGCTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147296874	ENSMUSSNP4574015	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320468887	CHEV_2_118178927	CHEVERUD	SCREENING_POP	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs47206340					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118183672 () rs orientation: forward

Symbol	Name	Function Class
Gm56462	predicted gene, 56462	1860 bp downstream
Gpr176	G protein-coupled receptor 176	Intron
Rr563221	regulatory region 563221	971 bp proximal