rs47206110 SNP Detail

Summary

• ID
  rs47206110
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101294286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATAGATGC AATTAAGATT
  CGCACACAAG CATGCACATG CATCTCCTCA GCGCTGCAGC ATTCCAGGCT CCTGTCAGAA
  GAGCACGCCC ATGGCTCCCT ACCCCAGAAA CTCAAACTAC CATGGAAACG GCTTTAATAC
  CCAACTCGTG CAAGAAACTT AAGAGAAATC CAATGAGATG CTGAATAATG AGTGTGTGAG
  R
  GGGATAAGGC TCAGGAGTCA GACAGAACTG CATCCACACT GGACATCTTC ATTGGCTAAC
  TGTTTGATCT TGGATGAATA CTGTCTCTGG GCGCGCGCGC GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTATGTGCGC GCACACGCGC GCGCGTGTAT
  CTGTGTGCAT GGGTGTATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320428368	CHEV_2_101304098	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47206110					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101294286 () rs orientation: forward

Symbol	Name	Function Class
Rr561500	regulatory region 561500	1163 bp distal
Rr561501	regulatory region 561501	536 bp proximal