rs47202530 SNP Detail

Summary

• ID
  rs47202530
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148600584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATTTGTTA ACTCTCTGTC
  ATCATAATTC CTCTTAATTC TCTAATATGG TTTTATTCTA ATCTTTGAAC ATATCCGTAA
  TAGCTGCTCT GAAACGCTTA CCAGCTAAAT CTATCAACTG GGCCTCTCTC CGAGGCAGCA
  TCTACTAGAT GCCTTTTCTC CTGAGTAAGG CTCAACTTTC TCGTTTGCGT ATCTCAAACA
  M
  TTGTTGCTGG AAACTGTGCT TTTCAGACAA TATCCTGCTG GAAACTCTGG ATTGGGCTTT
  AATCCCTGCC ACCGCCACTG TTGCAGAGCC TTCCGGCTCT TGCTCAGAAG GGTTCTACAG
  CCCTGACTTC CTCGATGTGC ATTTGCCTTG TCTCTGCTGC TTGCCTTCGT TTCTGACCCT
  GCCTTCCTAA GTTCCCTGTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136065031	ENSMUSSNP2997719	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47202530					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148600584 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587222	regulatory region 587222	555 bp proximal
Rr587223	regulatory region 587223	1375 bp proximal