rs47198447 SNP Detail

Summary

• ID
  rs47198447
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:10459510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTGAGATG CACTCTAAAT GTAAACTACC CCCTGGATTT
  CAAAGACTTG GTGTAGGGAA CTGTAAAATA TTTCATTAAT AATTGTGAAG TGGAAACTTC
  W
  GGTTTCTTTG GAAAGTCAGT TGGGTCAGAT GGTGTTTTGC TGCGGCAGAG ACGTGCAGGA
  GTGTTTTCCT GAAGTGGGCA AAGGTGAAAG GATGCTCTC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134582248	ENSMUSSNP7007819	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47198447					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10459510 () rs orientation: forward

Symbol	Name	Function Class
Gm66278	predicted gene, 66278	within coordinates
Rr573635	regulatory region 573635	1225 bp proximal
Rr573636	regulatory region 573636	1310 bp proximal