rs47187673 SNP Detail

Summary

• ID
  rs47187673
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124068098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCACTACAG GCAAGACCCA
  CAATGCCATA GGCTAGAATC CTCCAGTGAG TGAAAGGTAG AAAGCTGAGT AACAGTGGTC
  CCTGCGCCCT GTTTTGTGAC TGCAGATGCA GTGAGACCGA CCGCTGCCTT GTATTTCTGC
  GCCATGTTTG CCCTGGTGGT GCACTGGACC CTCAGACTGT GAGCCAAACT AGACCCTTCC
  R
  TCCTTAAGTT GTCATGCATT GTGTTCACAA TATTAAAACT GTAGTACACT GCTGTGTATG
  GATAGGATAT TTTCTTTGTC TCTGATTCTC AAAAAATTGT ATAAGACCCA AAATACCCGT
  CTTAAGACTA TGGACAGATA TAGTTTACAT TTTAACTTAC CAACTTCTAA CATATTTCTT
  TGAGTTTAAA AAAAAATACG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926857	CHEV_3_123977367	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47187673					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124068098 () rs orientation: forward

Symbol	Name	Function Class
Gm43731	predicted gene 43731	within coordinates
Rr584584	regulatory region 584584	1089 bp distal
Rr584585	regulatory region 584585	446 bp proximal