rs47175426 SNP Detail

Summary

• ID
  rs47175426
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130589367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGATGTCCC TAGAGACGGA CCCAACAGAT TTAACACAGA
  GGTCACCTAC CCCAGAATTC CCTGATGTGC TTTAAATCAG GCCTGCAAGC TCACTTGGGC
  R
  TCTCTCTTTC TTGGTAATGG GGAGATCCCA GCATGCTGGA CTTCTGCAGA ATAAAACCCT
  CCTTGTTTAC ATACTATCTG AGTTCAGAAT GCTATTCTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135899907	ENSMUSSNP4742836	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47175426					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130589367 () rs orientation: forward

Symbol	Name	Function Class
Gm36443	predicted gene, 36443	within coordinates
Rr585209	regulatory region 585209	1695 bp distal
Rr585210	regulatory region 585210	1368 bp distal
Rr585211	regulatory region 585211	795 bp proximal