rs47174378 SNP Detail

Summary

• ID
  rs47174378
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:174334362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTACTCAA AGTACGGATG
  GACTGATATA ATCTCTCTGG AGGGTGAAGA GCTGAGAAAA GTCTCAAAAG TTCCTGTTGG
  TCCTGGTGAT TCCTATCGAT GGGAAATTTT GGAACTGAAT ATTCAGAATT TGAACAAAGA
  CATGCAGGCC AGAGAATTAT TTGTAGTAAG GTAAAATTGA AACAAACAAA CAAACAACAA
  R
  CCCAACCACT CTCTGGAGTT CAAAACACTA TTCATTAGTT GGCTCACAAA GGAGAAGAGT
  ATTTTGTGGG GTTTTAGAGA GAAAGAAGAG CCCAGGGGTC GGGAAGGTAT ATGAAGGTTG
  CTGAAAGAAG TTGGGGATAG TTGGGAACTC TGTCCAGGTG ACACAGGGTT CACAATATCA
  GAAAACAAGT TTGGATGATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148344150	ENSMUSSNP4097639	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47174378					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:174334362 () rs orientation: forward

Symbol	Name	Function Class
Rr572141	regulatory region 572141	387 bp proximal
Rr572142	regulatory region 572142	490 bp proximal