rs47167841 SNP Detail

Summary

• ID
  rs47167841
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18817939 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTGTATA TGCCATCTAA
  GTGCGGTGTC CTTTGAGGCC ATAAGAAAGC ATTGGAATCC CTAGAGCTGG AGTTAAAGGA
  GGTTGAGAGT CACCCAGTGT GGGAGCCAGC AACCAAACGT GAGTCCTCTG ATGTTGTGGT
  TTTAATGACA ATGGTATCTC TTCCTGTATG CTAAGAAAGA GATAGCTGAT TTTTCCATGA
  R
  TGGGTGAACA GGGCGTGGGG AGTAGAGATT GCTTTAATGA GACTGTTATG TTTGAATAAT
  TGGAATAATC ATCATCAGTT GCTGGAACTG TTTGGGAAGA ATTGGAGGAG TGGTGCTGGT
  GGTGGGCATT CTCAGGTAGT GCTCTGTCTG TCTGTCCATC TGATGCTTGT GGATTAGGAG
  GTAAGCTCTC AGCTAATGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133041725	ENSMUSSNP5941431	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47167841					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18817939 () rs orientation: forward

Symbol	Name	Function Class
Rr626951	regulatory region 626951	1486 bp proximal
Rr626952	regulatory region 626952	1612 bp proximal