rs47160397 SNP Detail

Summary

• ID
  rs47160397
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:128126645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTCCTGCTGG AGCCAGCCCC ACAAGTCCCG CTGGAGCCAG
  CCCCACAAGT CCTGCTGGAG CCAGCCCCAC AAGTCCTGCT GGAGCCAGCC CCACAAGTCC
  A
  GCTGGAGCCA GCCCCACAAG TCCTGCTGGA GCCAGCCCCA CAAGTCCAGC TGGAGCCAGC
  CCCACAAGTC CTGCTGGAGC TAGCCCCACA AGTCCTGCTG G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147739296	ENSMUSSNP1410846	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs47160397					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128126645 () rs orientation: forward

Symbol	Name	Function Class
Stat2	signal transducer and activator of transcription 2	Coding-NonSynonymous
Tssr96388	transcription start site region 96388	1715 bp upstream