rs47151719 SNP Detail

Summary

• ID
  rs47151719
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100689053 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C CAACAATGGA GGAGTGTTCC TCTTTCTCCA CATCCTTGCC
  AGCATCTGCT GTCGCCTGAG TTTTTTTTAT CTTAGCCATT CTGACTTATG TGAGGTGGAA
  C
  CTCAGAGTTG TTTTGATTTG CATTTCCCTA ATGACTGAGA ATATTGAACA TTTCTTTAGG
  GGTTTCTCAG CCATTCGAGT TTCCTCAGTT GAAAATTCTC T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss132168100	ENSMUSSNP6297621	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs47151719					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100689053 () rs orientation: reverse

Symbol	Name	Function Class
Cachd1	cache domain containing 1	Intron
Rr596037	regulatory region 596037	1852 bp proximal