rs47149692 SNP Detail

Summary

• ID
  rs47149692
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12626874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATAACCAAAA AAAAAAATTA AAAAATAAGC CTTCTTGTCA
  TTAACTCTAT ATGAGCTAGT ACCTCCAAAT AAATACACAA TCCTAATGTA TGAAGTAATG
  Y
  AGGCAATCTT AGTTTGTGAA CTAATACTGA CAATGGAGTC TCAAAACAAT TTTTCAGTTG
  TAAACTGAAT TCTGGGTCAA AATAGAGTTG AAACCAGCAG A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146023317	ENSMUSSNP323356	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47149692					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12626874 () rs orientation: forward

Symbol	Name	Function Class
Gm37985	predicted gene, 37985	within coordinates
Rr589092	regulatory region 589092	220 bp proximal
Rr589093	regulatory region 589093	1619 bp proximal