rs47143332 SNP Detail

Summary

• ID
  rs47143332
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:94447352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATGGCTC AGTGGTTAAG
  AGCACATTCC AGAGGTCCTG AGTTCAATTC CCAGCACCCG CATGGTGGCT CACAGCCATC
  TGTAATAGGG ATCCGATGCC CTCTTCTGGT GTGCCTGAAG ACAGCAATAG TGTACTGACA
  GACATGAAAT AAATAAATAA ATAAATCTTA AAAAAAAAAA AAAAAAGAAC TGAATGTACC
  R
  TGTTGCTAGA AACTTGATCT TAAGTAGTTG TCCTACAAAG CTGCAGTTAT GAGTCCTGAA
  GTAAATTTTA CATAGCAAGG GTCTCCTAAG TGAGGGTTTC TGTCATGTAA TACAAAAAAT
  TCCTGAATCA TGTCCAGCTG CTGAGCATCC ATAATTCTAG TAGGTTTATG TGTGGTTCTA
  AGACATCAAG AGAGACAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147049660	ENSMUSSNP4931543	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs47143332					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:94447352 () rs orientation: forward

Symbol	Name	Function Class
Rr595335	regulatory region 595335	1829 bp distal
Rr595336	regulatory region 595336	562 bp distal
Rr595337	regulatory region 595337	355 bp proximal