rs47139151 SNP Detail

Summary

• ID
  rs47139151
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146046666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGGACAT TTTCGGCTTT
  ACAGGTTGAG TCAGAACTGA GCCAGTGAAC GACTTTATTT TTTTCTCATT CGGCAATTTA
  CATTTAGAAA GGAAAAAGGG TTATTAGCTC TCAAGCTGTA TGAAATATGA GACTGGATTT
  CAGCCTGCAG GCAGACTTTC GAAGTCTCTG CACAGCGTCC CCGTAGACAG CCATTAGGGC
  C
  TTGCTTAAAA ACCTGAAGTG GTCAGAAGCT GTCTTTCAAA GTCACCAGCT CCATCTAAGC
  GCACCTTAAA TTGCTAGAAA GTACTTTTAT GTTGGCTTGG AATTTGCCTA CTTCATCTTA
  CTACCAAGGC ATTCTTTAAG TGCTGATTAA ACTTCTAGAA ATGTCTGTTG GTGGAAACAG
  TTTTCTATGA CCTGTCTCCC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321009997	CHEV_3_146003875	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47139151					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146046666 () rs orientation: forward

Symbol	Name	Function Class
Rr587006	regulatory region 587006	441 bp distal
Rr587007	regulatory region 587007	1084 bp proximal