rs47110358 SNP Detail

Summary

• ID
  rs47110358
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:96593890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAAGCTAA GCTATGCTAA
  GTCATCGCAT CGATAAAATA TTCTGGAAAT CTCATTTCAT TTGATTAATA TCTTGGGTCA
  AATAAGGGTT GCATTAAAAT TCAGCAGATA TTTGCATTGT GGCTTCATTT TGTAATTATG
  TAGAGTCTTT GTAGCTTGTC AGACAAAACA TTAGACCAGA TTTAAGGAGA GCTAGGAAGG
  R
  TGCCCTGCAT TGGGTGATTT TAAATGCAGT CCTAGGAGGC TCCAGAGAGT CTGAAACTGC
  ATCATGGCTT TCTGTTAAAC TCACTGTCAC CAACACAGTT ATTTGCACGT CTAAATAGTG
  TAAGATGTTT GTCTAAGCGA AGGGAATAAA ACAGGAGCAA GACAGTGCAC AGAAGGGGTT
  TTGGCAGCAT TTGAGTTGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146981861	ENSMUSSNP2089625	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47110358					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:96593890 () rs orientation: forward

Symbol	Name	Function Class
Lrrc4c	leucine rich repeat containing 4C	Intron
Rr561438	regulatory region 561438	within coordinates