rs47105210 SNP Detail

Summary

• ID
  rs47105210
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55169739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA GCGACAGCCA GAGGTCAGAT
  S
  CTAGGTAGGA AGTCTTGGAA ATGGT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss62402332	NES17240455	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G	G	G		C	G	G	G		G
ss139573331	ENSMUSSNP4763510	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss324640931	CHEV_14_55551119	CHEVERUD	SCREENING_POP	f	SNP										G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs47105210					SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62402332	NES17240455	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55169739 () rs orientation: forward

Symbol	Name	Function Class
Gm62784	predicted gene, 62784	1998 bp downstream
Il25	interleukin 25	413 bp upstream
Rr389680	regulatory region 389680	1384 bp downstream
Rr492369	regulatory region 492369	1520 bp distal
Tssr125681	transcription start site region 125681	762 bp upstream