rs47098428 SNP Detail

Summary

• ID
  rs47098428
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136146727 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCC CAGTGGAGAT CTTGGGGGAG
  M
  TCTCTGAGCT TTTCAAGTCT TTCTC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss135935202	ENSMUSSNP5290017	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320973865	CHEV_3_136103930	CHEVERUD	SCREENING_POP	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47098428					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136146727 () rs orientation: forward

Symbol	Name	Function Class
1700030L20Rik	RIKEN cDNA 1700030L20 gene	within coordinates
Rr585823	regulatory region 585823	1360 bp proximal