rs47087053 SNP Detail

Summary

• ID
  rs47087053
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101294107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAACAGACT GCTGTCATCA
  TAACAAGGTC CTTTGAAATC CAGAAAGAAC AGCCCCATCA ATCAAGATAT CATTCTCATT
  AGTCTCTTTC TAGCCTATTG CCTTCGGATT ACCACAGGCT GCCAGCAGAG ATGTAGGACC
  ACAATTAGTA AAGTATTACT ACAGATGCAG GGTGCAGCGT GATAGATGCA ATTAAGATTC
  R
  CACACAAGCA TGCACATGCA TCTCCTCAGC GCTGCAGCAT TCCAGGCTCC TGTCAGAAGA
  GCACGCCCAT GGCTCCCTAC CCCAGAAACT CAAACTACCA TGGAAACGGC TTTAATACCC
  AACTCGTGCA AGAAACTTAA GAGAAATCCA ATGAGATGCT GAATAATGAG TGTGTGAGAG
  GGATAAGGCT CAGGAGTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320428367	CHEV_2_101303919	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47087053					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101294107 () rs orientation: forward

Symbol	Name	Function Class
Rr561500	regulatory region 561500	984 bp distal
Rr561501	regulatory region 561501	715 bp proximal