TCCATCTTCA AAAAGAAACC TTGCGTTGGG GGGTGGGGGG AGAGCTATTG ACAAAAACAG TACTGCTGAC CTCTGGCCTA ATACATACAC GCTCACCCTC ACACTCACAC TTTCCTGTAA TTGAGGTGAC ACCTCCACAG AGACATCTTC CTGGACCGCT CTGCTGCCCG GCCACCCACA AGCCCTTCTT TCCCTCTCCT Y GGTATTTACA ACTTTCTTCA GCTGCCTTTT TCCCTGGATT CTTTGTTCGT GATTCCCACT CTCAACGTGG ATGCAAAGTT CCAGGATGAC AGAAAACGAG TTGGTCTTAT TGTAGTGGAG CAGTTGACCA GGCACGGACA GTCGAGTGGA TGGAGGATGG ATGGATGAAT GAATGAATGG ATGGATGGAT GGATGGATGG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss148241326 | ENSMUSSNP7198602 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | ||
ss320608373 | CHEV_2_165420143 | CHEVERUD | SCREENING_POP | f | SNP | T | C | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs47075990 | SNP | T | T | T | C |
Location: Chr2:165436563 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi12713 | CpG island 12713 | within coordinates | ||||||
Eya2 | EYA transcriptional coactivator and phosphatase 2 | 389 bp upstream | ||||||
Rr569954 | regulatory region 569954 | 689 bp distal | ||||||
Rr569955 | regulatory region 569955 | within coordinates | ||||||
Rr569956 | regulatory region 569956 | 400 bp proximal | ||||||
Rr569957 | regulatory region 569957 | 571 bp proximal | ||||||
Rr569958 | regulatory region 569958 | 748 bp proximal | ||||||
Tssr21727 | transcription start site region 21727 | 366 bp upstream | ||||||
Tssr21728 | transcription start site region 21728 | 1528 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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