rs47071682 SNP Detail

Summary

• ID
  rs47071682
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125373838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGGGGCAT TCTTTCTGAG
  CATTTCAGTC CAGGGCACAC AGGAGGAAAC TTCCAAAGGT GAAGTCTCAA CATTTCTGCT
  GGTCCCCACT GAGTTTGTGT CAAGAAACAC ACACATACAG AAAGAGAGAT GGGGGGTATT
  TTTACTTCAT TTCTGTCTGT TTATGGGGGA TTTTCCTGCT GTTAGAGGGT GGAAAAATAA
  R
  TGATTACTCA CAAACATCTA CTTCAGCCCA AGACTCACTC TCATCTCCAA GATTCCCACT
  CCCATTGTCT CATCTCAGCC TCTGGCAAAT GTTACTCTAA GCAGAGCCAA TGTGGACACC
  GTGGCACTGA AAAGTTGGCC ATGGCTACCC CTCTAGTCTT ACCCCATACA GACTTGTTTC
  TATCTGCATT GGTACATTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147480377	ENSMUSSNP6465284	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47071682					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125373838 () rs orientation: forward

Symbol	Name	Function Class
Gm75244	predicted gene, 75244	within coordinates
Rr564232	regulatory region 564232	930 bp distal