rs47068559 SNP Detail

Summary

• ID
  rs47068559
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37843246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGGTCACC GTGGCCAGCT AACCTAGCCT GAGTTGAGGC
  CCCAGTGAGA GCCCAGGTCC CAGTGAAAAC ACCCTGCTTC ATTAAACATG GTGGATTGTG
  T
  TTGGTGAAGG ACACATGAAG TTGACCTCTG ACTTCCACGT GCGTCACACA CACACACACA
  CACACACACA CACACACACA CACACACACA CACTCCACA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134814049	ENSMUSSNP1832610	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss320712823	CHEV_3_37688019	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47068559					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37843246 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	1976 bp distal
Rr575565	regulatory region 575565	356 bp distal
Rr575566	regulatory region 575566	225 bp proximal