rs47063065 SNP Detail

Summary

• ID
  rs47063065
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135002410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTGGCTA GCTAGTTTGT
  GGTAAAGTAA GAAAAGCCAG CAGGCTGTCC TGTGGAGCAA AGCTTAAACC AGAAACAAAT
  AGAAGGGACA GCTGGACTCT GAACTGGGTC CCCTGTTAAT TTTTCACAGA ACTGTGAACA
  GATTAAAGTC CCCTCACAGT ATAGCCTTTC CACCGTGATC CCAAATGGTA AATTCAAACA
  S
  ACACACACTT AAAATGGCCC AGCAGAGCCT CAAAAGACTC CACATTGGCC CCAAGACTAC
  TGGGTCCCAG TTAGGATTTA TCCAAGTCAT TTTGGGTCCC CAAATTACTC CCTCACATGT
  ATCTGTGCTG GGCCCATGCT GGCTCCCAGC CACCAGCACA GAGATGGCCC ACACAGGGAA
  ACAATAGCAA TGAAAGGGTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147543370	ENSMUSSNP5309559	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47063065					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135002410 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15068	CpG island 15068	1476 bp distal
Rr398589	regulatory region 398589	1908 bp downstream
Rr601980	regulatory region 601980	1795 bp distal
Rr601981	regulatory region 601981	1970 bp distal
Rr601982	regulatory region 601982	within coordinates
Rr601983	regulatory region 601983	1715 bp proximal