rs47055517 SNP Detail

Summary

• ID
  rs47055517
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38829166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAAGACAA AATACTCAAT
  GATTGTCTCA GCTCTTCATG GTCGTATCCA TGAACTGTTT ATGATTTTTA TGGAAAAAAA
  TCAAGACTGT GTTACAGGAC ATTTAACCTT GGAGTGATAT AGATACACTT ATATGCGTTT
  GATTTCATTT TCACCGGGGA AAAATGTAGC CTTGGGAAAA CCTTGTCAGG AAGAAGCATC
  R
  CTAGAGAGCG AGCATGACTT CAGACCCTCA AAGAACAGCA CAAATAACAA AATTACCTCA
  CTTCTACTGT GACACCATCC ACCCAAAGCC CTAGTAATGG ATGCGGTCAT CCTAACCCGC
  ACAGAGGCAG GACCCACATC CACTGGCTCT TGTTAACAGC ATCACTCCCT GCTCCTCTGA
  GTCCAGGACA GAGCTTAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134843738	ENSMUSSNP6909742	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss320722862	CHEV_3_38673939	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47055517					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38829166 () rs orientation: forward

Symbol	Name	Function Class
Rr575702	regulatory region 575702	1829 bp proximal