rs47031441 SNP Detail

Summary

• ID
  rs47031441
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135795888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGTCAGA GGACAGTTTT
  TGGAAGTGGG TTTTCTCTTT CCACCGTGTA GGTCCAGGGG ATGGACCTCA ATGCCAGGCT
  TGGTGGAAGG AAGCCTTACA TGCTGAGCTG TGTGTCCAGA CCCTCCAGTG GTTTTCCTAT
  TAACTATCTA CTATAACTTT TCTAGTGAAC TCCAGGTCAT TTCTTGCTTT CCTCCAGTGG
  G
  TCCTGACTCG CGTGATTACT CATTATTTTG CCTTATTGTG TTTTAGTTTT TGTTGCTAGA
  GACGGAATCC AGGGCCTTGC ACATGAGGAG CAAGTGAGTT ACTGCCCAGC CACACCCCAA
  ACTATTAAAG CAAGCTGTTG GCCTGTTGCT TCCTGTTTTG TTTTTAGTTG GGAAAAAAGG
  TGAGAGTTAA GCAAAGACAC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147557337	ENSMUSSNP5413878	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47031441					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135795888 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15093	CpG island 15093	1413 bp proximal
Rr602257	regulatory region 602257	1251 bp proximal
Rr602258	regulatory region 602258	1535 bp proximal