rs47030259 SNP Detail

Summary

• ID
  rs47030259
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:95811284 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AAGTGGGGAA AGTCGTGTTT CCGGAACATG CTGATAAAAA
  GTAAGTCTGT ATGAAGCTGC CAGAGACTGA GAGTGCATGG GAGGAGGGGC AGCTCTTGCT
  C
  TGGGATGGAC CTTGGATCAA CCCTGGCTCT TCTTTCACTT AGACCAGCGG TTCCCAGCCT
  TCCTAAAGCT GCGGCCAGTT CCTCCTGTCG TGGTGACCCC C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147068510	ENSMUSSNP3380375	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47030259					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:95811284 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fggy	FGGY carbohydrate kinase domain containing			Intron
				Noncoding-Transcript-Variant
Rr595493	regulatory region 595493			1287 bp proximal
Rr595494	regulatory region 595494			1388 bp proximal
Rr595495	regulatory region 595495			1620 bp proximal
Rr595496	regulatory region 595496			1938 bp proximal