CGGGG CCAAGTATTT ACCTTCTCTG R GCTCCTAATT CTTCATTTGC ACTAA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss134784803 | ENSMUSSNP1682446 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | ||
ss320703507 | CHEV_3_36511932 | CHEVERUD | SCREENING_POP | f | SNP | G | A | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
DBA/2J |
LG/J |
SM/J |
||||
rs47023649 | SNP | A | A | G | A |
Location: Chr3:36667159 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Bbs7 | Bardet-Biedl syndrome 7 | Intron | ||||||
Cpgi13088 | CpG island 13088 | 86 bp proximal | ||||||
Rr575383 | regulatory region 575383 | within coordinates | ||||||
Rr575384 | regulatory region 575384 | 265 bp proximal | ||||||
Rr575385 | regulatory region 575385 | 418 bp proximal | ||||||
Tssr28874 | transcription start site region 28874 | 472 bp upstream | ||||||
Tssr33039 | transcription start site region 33039 | 329 bp downstream | ||||||
Tssr33040 | transcription start site region 33040 | 360 bp downstream | ||||||
Tssr33041 | transcription start site region 33041 | 408 bp downstream | ||||||
Tssr33042 | transcription start site region 33042 | 451 bp downstream | ||||||
Tssr33043 | transcription start site region 33043 | 479 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/18/2025 MGI 6.24 |
![]() |
|