rs46998082 SNP Detail

Summary

• ID
  rs46998082
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60703778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTTCAGA TGCCCCTGTT
  TCTGACTGTA AAGCTTTTAT CTCCTGTCTC TTGTCCAGTA GGAAAATCAC AGAGCAAAAT
  GAATAGCTTG AAAAAGGGTT GGGGTGGGGG ACATACAATT TTTAAATTAA ATTATAATAT
  ACTCATTCAG ATTTAGTGTA TTTTTCCCCT CAACAACGAG TTTACAGAAA ATAGACAACT
  K
  CTATATTAAA AGCCTGATAG CCATATGACC GTATTGCTGG TTGTGCTGGC AAACACCAGC
  AGGATACACT CCAATGCTGA AGACTGGAGG GTCATAGGAA ATACAACCTT ATCTCTCTTA
  AACAGCAACC AACACACAAA AGTTAGTGTT TTCTTCTATG AATAAACCAA AAGTACACTT
  TATTTCCTAA CAAAAAGCTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135220958	ENSMUSSNP493532	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46998082					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60703778 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Gm38326	predicted gene, 38326	1629 bp downstream
Rr577459	regulatory region 577459	1469 bp proximal