rs46994655 SNP Detail

Summary

• ID
  rs46994655
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:133962915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAAAAGCT AAAAGAACAC
  CAGGTTCCTT CTTCCGGCTT ACACATGCAT GCATAGCTGT GTGCACGTGT GTGTGTGTGT
  GTGTGTGTGT CCTCCCCACA ACACACACAA ATAAATACAT ATAAATAAGG AAATATTTTT
  CTTCTTTTAT AGCACATCGG GAGAAATGGC TCAGAGATTA AGGGCACTTC CTGCTTTCCA
  R
  GAGGACCGGA GTTCGCTTCC CAGCCCCCAT ATCAGGGGTT TCACAACTGT GTTAGCTCTA
  GCTCCATGAG ATCTGCCCCC CTTCTTCTGG CCTCTCAGGG CATCTGTACA GGCACACTGA
  TACATACATA AAAATAAAAA TAAAAATAAA GTAATTTTTA AAAAATGGTG AGGGGAGGAA
  GCTTTTCAGG GCTTCCTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss133768828	ENSMUSSNP2156730	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321975821	CHEV_6_133935970	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46994655					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:133962915 () rs orientation: forward

Symbol	Name	Function Class
D6Mit290	DNA segment, Chr 6, Massachusetts Institute of Technology 290	512 bp proximal
Rr380154	regulatory region 380154	688 bp upstream
Rr639549	regulatory region 639549	596 bp distal